Biology, Bioinformatics.
概要
| 作品: | 499 作品在 0 項出版品 0 種語言 | |
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書目資訊
Development of microarray genomic biomarkers and their application in clinical trials.
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Enhanced inter-study prediction and biomarker detection in microarray with application to cancer studies.
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Building a semantic blog support system for gene Learning Objects on Web 2.0 environment.
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Statistical methods for analyzing genomic data with consideration of spatial structures.
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Statistical mechanical approaches to informatics: Discovering motifs and clustering data.
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Population, phylogenetic, and coalescent analyses of character evolution in gossamer-winged butterflies (Lepidoptera: Lycaenidae).
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Tensor generalizations of the singular value decomposition for integrative analysis of large-scale molecular biological data.
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Fungus to fibroblast: A functional genomic exploration of eukaryotic transcriptional regulation.
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Experimental design and the detection of adaptive molecular divergence in phylogenetics and genomics.
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Comparative genomics and application to specific biological systems: Hyperthermophily and shell-forming proteins.
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Applying machine learning methods to suggest network involvement and functionality of genes in Saccharomyces cerevisiae.
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Evolutionary molecular clocks: Patterns of sequence change and expression divergence.
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Origin and evolution of eukaryotic gene sequences derived from transposable elements.
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A Bayesian method for divergence time estimation from mitochondrial and homologous Numt sequences with application to African gorilla phylogeography.
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Functional conservation of divergent regulatory sequences: Lessons from Drosophila, scavenger flies, and the true fruit flies.
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Predicting protein function using sequence derived features selected by genetic algorithms.
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Experiment planning for protein structure elucidation and site-directed protein recombination.
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Stress, mixed messages, and hormone signaling: Regulation of translation and the unfolded protein response in pituitary gonadotropes.
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Gene expression profiles as molecular indicators of dissolved oxygen stress in grass shrimp Palaemonetes pugio Holthuis 1949.
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Highly scalable short read alignment with the Burrows-Wheeler transform and cloud computing.
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SVM and a novel POOL method coupled with THEMATICS for protein active site prediction.
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Advancing ontology alignment: New methods for biomedical ontology alignment using non equivalence relations.
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Advances in computational mass spectrometry: Phosphoproteomics and proteogenomics.
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Automated integration of biomedical information for the support of genome-wide association studies.
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Identification and assessment of the molecular targets of lead and acrylamide using a novel proteomic system coupled with bioinformatic analysis.
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Contextual analysis of variation and quality in human-curated gene ontology annotations.
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New clustering and feature selection procedures with applications to gene microarray data.
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Using structural information in modeling and multiple alignments for phylogenetics.
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Fast Bayesian methods for genetic mapping applicable for high-throughput datasets.
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Computational prediction of chemopreventive and therapeutic options in cancer using whole-genome gene expression studies.
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Discovery and interpretation of genetic variation with next-generation sequencing technologies.
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High-throughput genomic assays: Applications and analysis of DSL technology and next-generation sequencing.
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Computational analysis of human genomic sequence variation and Drosophila small RNA transcriptome.
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Computational prediction of protein function for cell cycle kinases and histone methyltransferases from conserved biophysical properties.
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Evidence for hierarchical control of conserved, discrete motility types in crawling motility.
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A novel probabilistic framework for microarray data analysis: From fundamental probability models to experimental validation.
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Temporal encoding and homeostatic control in the IKK-IkappaB-NF-kappaB signaling system.
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Optimal design of experiments for emerging biological and computational applications .
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Integrative pattern recognition techniques and their applications to microarray gene profiling data analysis.
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Statistical models for removing microarray batch effects and analyzing genome tiling microarrays.
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Application of statistical properties of short sequences in the analysis of 16S ribosomal RNA and the identification of bacteria.
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Genomic analysis of highly purified astrocytes reveals in vivo astrocyte gene expression: A new resource for understanding astrocyte development and function.
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Automated triage of acute stroke cases: Integrating imaging and clinical information to prioritize clinical interpretation.
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Sequencing and comparative genomics of Leptospira interrogans serovar pomona and Leptospira kirschneri serovar grippotyphosa.
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Model-based genomic/proteomic signal processing in cancer diagnosis and prediction.
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Machine learning and graph theory approaches for classification and prediction of protein structure.
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Relational database models and other software and their importance in data analysis, storage, and communication.
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Accurate prediction of causative protein kinase polymorphisms in inherited disease and cancer.
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Mining biological complexity: Cross integration of large-scale metagenomics, environmental, and chemical datasets.
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Expression systems and database for biological, structural and bioinformatic studies of antimicrobial peptides.
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A multi-level biomedical ontology-enabled broker: Dynamic service-based data source integration.
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Genome-wide reconstructions of the evolution of genes and regulatory elements in Ascomycota fungi.
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Genomic and computational analyses of the Drosophila sex determination regulatory network.
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Pharmacogenomic and mechanistic studies on dietary factors in chemoprevention of cancer.
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Data mining techniques to enable large-scale exploratory analysis of heterogeneous scientific data.
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Protein-DNA binding: Discovering motifs and distinguishing direct from indirect interactions.
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A multiphasic study of patterns in diversity and structure within a coastal Vibrio cholerae population.
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Structure-based redesign methods to enhance the binding affinity of the TCR/PEP-MHC interface.
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Improving VAST structure alignment performance and analysis of small molecule contacts in protein structures.
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Toward utilization of neuro-fuzzy systems for taxonomic identification using psittacines as a case study.
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Mutations in NPr/HPr affecting phosphoryl transfer in the phosphotransferase system of Escherichia coli.
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Protein-protein interactions and metabolic pathways reconstruction of Caenorhabditis elegans.
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Computational prediction of protein-protein interactions in novel organisms with application to chloroviruses.
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Quantitative, predictive modeling of biochemical networks: A machine learning and information-theoretic approach.
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Protein-protein interactions in poliovirus polymerase: Computational and biochemical investigations.
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Comparative genomic analysis, and host-pathogen interactions of Porphyromonas gingivalis.
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Understanding cellular function through the analysis of protein interaction networks.
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Knowledge discovery tools for extraction and analysis of practice patterns from labor and delivery data.
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Using mixed effects models to integrate high-dimensional, genomic data and an array-based analysis of the evolution of brain aging.
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Advances in the prediction and understanding of transcriptional regulation in yeast.
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A mixture of experts approach to protein structural domain boundary classification.
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Objectively obtaining information from gas chromatographic separations of complex samples using novel data processing and chemometric techniques.
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Computational solvent mapping of proteins for binding-site identification and characterization.
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Hox targeting in vertebrate forelimb induction: Expression and comparative genomics.
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Spectrophotometric, mass spectrometeric, and structural studies of the prototypical G protein coupled receptor rhodopsin.
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Computational intelligence based classifier fusion models for biomedical classification applications.
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Chloroplast comparative genomics: Implications for phylogeny, evolution and biotechnology.
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A population genetics analysis of the human T cell costimulatory locus in Type 1 diabetes.
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The bioinformaticist's toolbox in the post-genomic age: Applications and developments.
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Comparison of dChip and Affymetrix microarray analysis: NRF-1 and PGC1 gene expression in type II diabetes.
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Comparing gene expression profiles of cell culture models with profiles of tumor xenografts and patient tumors: Implications for lung and breast cancers.
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A novel statistical method for microarray data integration: Applications to cancer research.
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Computational tools for peptide quantification using mass spectrometry and their application to the proteome of Prochlorococcus marinus MED4.
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Efficient case-based reasoning through feature weighting, and its application in protein crystallography.
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Modeling and partitioning the nucleotide evolutionary process for phylogenetic and comparative genomic inference.
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Bioinformatic and experimental analysis of hox and epidermal wound response enhancers in Drosophila.
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Machine learning for the analysis of transciptional regulation and biological systems.
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One-dimensional free energy surface models of protein folding: Connecting theory and experiments.
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Role of LINE-1 retrotransposon in genome evolution: Mechanisms of L1 integration and L1-mediated creation of new genes.
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How do the codon assignments of the genetic code influence the evolution of protein coding gene?
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Computational prediction of essential genes, and other applications of bioinformatics to genome annotation.
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Representing, extracting and reasoning with temporal information in clinical narrative reports.
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Informatics approaches to translational research: Management and analysis of clinical and high density genomic data.
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Identification and characterization of novel antiretroviral compounds: From small molecule library screening to rationally designed compounds.
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Advances in Diapriid (Hymenoptera: Diapriidae) systematics, with contributions to cybertaxonomy and the analysis ofrRNA sequence data .
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Modeling and analysis of the Escherichia coli transcriptional regulatory network: An assessment of its properties, plasticity, and role in adaptive evolution.
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Experimental and computational studies of the in vivo genomic repertoire of DNA-protein interactions in Escherichia coli.
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Bioinformatics tool development and sequence analysis of Rosaceae family expressed sequence tags.
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Search for functional alleles in the human genome with focus on cardiovascular disease candidate genes.
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Algorithms and data structures for cache-efficient computation: Theory and experimental evaluation.
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Regulation of V(D)J recombinase expression and the role of germline transcription in recombinase targeting during mouse B-cell development.
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Genetic polymorphisms in bovine leukemia virus genome: Transcriptional promoter, regulatory genes, and envelope structural gene.
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RNA secondary structure prediction and an expert systems methodology for RNA comparative analysis in the genomic era.
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From crabs to hamsters: Bioanalytical mass spectrometry for peptidomic analysis and biomarker discovery.
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Identification of small molecule inhibitors of simian immunodeficiency virus Nef-mediated enhancement of virus replication.
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Systems engineering based approaches for biological network inference, analysis and redesign.
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Posterior decoding methods for optimization and accuracy control of multiple alignments.
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Analysis of proteomics and genomics based on signal processing and communication theory.
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Multiple layers of gene expression regulation during murine embryonic stem cell differentiation induced by Nanog down regulation.
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Decoding mammalian gene regulatory programs through efficient microarray, ChIP-chip and sequence analysis.
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Symmetry and asymmetry analysis and its significance in neuro-imaging applications.
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Folding biological sequences on a three-dimensional triangular lattice: Algorithms and tools.
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Counting directed acyclic graphs and its application to Monte Carlo learning of Bayesian networks.
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Towards a complete transcriptional regulatory code: Improved motif discovery using informative priors.
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Data preparation for clinical data mining in developing a problem list proposing system.
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New statistical methods in bioinformatics: For the analysis of quantitative trait loci (QTL), microarrays, and eQTLs.
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Neural network and bioinformatic designs for predicting HIV protease inhibitor resistance.
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Using simulation to study behaviors of parameter estimates in non-linear regression models.
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DNA Polymerase Fidelity: A Computational Study of Pol lambda and Other X-Family Enzymes.
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Characteristics of PLD-alpha C2 domain and regulation of ripening-induced gene expression in tomato fruits.
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Adapting Polony Technology to Oligonucleotide Fingerprinting of Ribosomal rRNA Genes for Microbial Community Analysis.
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An integrative genomics approach identifies key pathways and microRNA networks associated with leptin-mediated weight loss.
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Computational identification and characterization of protein-DNA interactions involved in transcriptional regulation.
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Design and evaluation of an associative classification framework to identify disease cohorts in the electronic health record.
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Automated classification of the narrative of medical reports using natural language processing.
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An adaptive document classifier inspired by T-cell cross-regulation in the immune system.
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A predictive model for secondary RNA structure using graph theory and a neural network.
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Lateral transfer and Chlamydia a phylogenetic and genomic approach to Chlamydia evolution.
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Sigmoid: A Scalable and Integrative System for Pathway Bioinformatics and Systems Biology.
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Development and application of ligand-based and structure-based computational drug discovery tools based on frequent subgraph mining of chemical structures.
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Research on random permutations of long-range dependent sequences and on drug target prediction.
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Using the Semantic Web to support knowledge integration, retrieval and expansion for ecoinformatics.
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Functional analysis of genes using the gene ontology: Gene similarity, clustering, and classification.
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Biochemical and biophysical characterization of the histone chaperone protein Asf1.
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Probe-target hybridization modeling and its application to the analysis of microarrays.
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Informed structural priors for Bayesian networks: Applications in molecular biology using heterogeneous data sources.
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DNA reassociation kinetics and development of microsatellite libraries in black spruce (Picea mariana) and red spruce (Picea rubens).
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Discovering gene interactions by image analysis and by reverse engineering genetic networks.
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An integrative computational analysis of the human transcriptome: Genomic structure, expression patterns and regulatory controls.
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Improving the classification of microarray data: Supervised and unsupervised methods.
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Selective genotyping using Genome Wide Association Studies for mapping loci associated to fiber diameter in Merino sheep.
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Genomic analysis of the heat shock response and its relationship to growth rate in Saccharomyces cerevisiae.
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Evolutionary and functional impacts of short interspersed nuclear elements (SINEs) revealed via genomic assessment of felid canSINEs.
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Tomato plants overexpressing peroxidase and it's genomic response to caterpillar herbivory.
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An information theoretic framework for identification and modeling of gene-gene and gene-environment interactions.
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From topological network analyses and alignments to biological function, disease, and evolution.
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Paradigms of evaluation in natural language processing: Field linguistics for glass box testing.
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Optimization algorithms for site-directed protein recombination experiment planning.
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Development and testing of algorithmic solutions for problems in computational genomics and proteomics.
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Enhancing sensitivity for surface plasmon resonance biosensors using periodic structures and spectro-angular image analysis.
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Graph connectivity: Approximation algorithms and applications to protein-protein interaction networks.
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Automated methods of auditing and using terminology/ontology knowledge bases for natural language processing.
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Prediction of protein binding and folding from molecular geometry and empirical scoring functions.
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Reverse engineering the mechanisms and the dynamical behavior of complex biochemical pathways.
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Annotating a corpus of biomedical research texts: Two models of rhetorical analysis.
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Structural bioinformatics based method for predicting the initial adsorbed protein orientation on a surface.
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A Neural Network Model to Predict the Nonadherence to Screening Mammography Among Asian American Women.
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A machine learning approach to query time-series microarray data sets for functionally related genes using hidden Markov models.
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Informatics framework for evaluating multivariate prognosis models: Application to human glioblastoma multiforme.
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Type 2 diabetes disease progression and gene array analysis in adipose tissue of Goto-Kakizaki rats.
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Computational studies of the functional states associated with epidermal growth factor receptor activation.
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Devising effective similarity measures and learning algorithms for the study of metazoan gene expression.
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Phylogenomic analysis of Escherichia coli methyltransferases and characterization of a novel subfamily of enzymes performing methyl transfer.
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Tradeoffs, Mobile Genetic Elements and Horizontal Gene Transfers in Microbial Evolution.
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Design and implementation of a data mining based cyber attack defense technique for hospital information system.
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Use of family history to improve risk prediction in clinical care: Colorectal cancer as an example.
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Computational Methods for Accelerated Discovery and Characterization of Genes in Emerging Model Organisms.
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VirtualMindTrial: An intelligent questionnaire system for clinical trial recruitment.
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Exploratory Analysis of Pathogen Resistance Responsible Genetic Elements in Two Eudicots from Whole Genome Sequence.
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Discovering Inner Ear and Central Auditory System Cellular Pathways That Might Contribute to Age-related Hearing Loss.
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Functional classification of divergent protein sequences and molecular evolution of multi-domain proteins.
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A minimum spanning tree based clustering algorithm for high throughput biological data.
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From protein redistribution to peptide detectability: Applications and developments of tandem mass spectrometry.
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A Phylogenetic, Ecological, and Functional Characterization of Non-Photoautotrophic Bacteria in the Lichen Microbiome.
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Computational Modeling of Anti-aggregation Effect of Non-steroidal Anti-inflammatory Drugs in Alzheimer's Amyloidogenesis.
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Chromosomal interactions and its impact on gene regulation: Transvection at the Men locus in Drosophila melanogaster.
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Enhancing protein fold prediction accuracy using new physicochemical-based features and fusion of heterogeneous classifiers.
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FPGA Implementation & Acceleration of Building blocks for Biologically Inspired Computational Models.
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Microarray image denoising using complex gaussian scale mixtures of complex wavelets.
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Estimation and inference in high dimensional networks, with applications to biological systems.
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Analysis of three dimensional structure of membrane proteins using bioinformatics and computational analysis.
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Quantifying uncertainty and incorporating environmental stochasticity in stock assessments of marine mammals.
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Prediction of transcription factor binding sites using information from multiple species.
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Advanced data mining techniques for identifying correlation between gene expression and promoters.
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Clustering, classification and function estimation for high dimensional data arising from bioinformatics and related domains.
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Distributed web service coordination for collaborative applications and biological workflows.
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GETool software tool for geometric localization of cortical abnormalities in epileptic children.
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Engineering systems neuroscience: Modeling of a key adaptive brain control system involved in hypertension.
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A comprehensive analysis of multiple variables correlated with avian extinction risk and conservation status.
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Assessing Factors affecting Physician's Intention to adopt Biometric Authentication Technology in Electronic Medical Records.
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Robust analysis of small RNA data and novel analysis techniques for discovery and validation of microRNAs and their targets.
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Analyzing and modeling large biological networks: Inferring signal transduction pathways.
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Method development and application in protein structure prediction, computational molecular docking and network biology.
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Identification of secondary and tertiary motifs in DNA sequences through naive Bayesian text classification.
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Systems biology analysis of macrophage foam cells: Finding a novel function for peroxiredoxin I.
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Active learning for sequential screening and classification of molecular and genomic data.
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Application of computational sequence and structure analysis to the description of protein function.
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A collection of novel algorithms for low memory HMM decoding allowing for parallelization and variable sequences.
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Application of language technologies in biology: Feature extraction and modeling for transmembrane helix prediction.
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Comparative study on analysis and visualization tools using BLAST BLAST-AV: BLAST analysis and visualization tool.
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Statistical protein quantification and prioritization in label-free shotgun LC-MS/MS proteomics.
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Comparative and molecular approaches to improve identification, classification, and therapeutic approaches to cancer.
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Bioseparation process improvement via genomic manipulation: Development of novel strains for use in Immobilized Metal Affinity Chromatography (IMAC).
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What Difference Does a Form Make: Redesign and Evaluation of a Form for Documenting In-Hospital Cardiac Arrest.
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Systematic approach to basic local alignment search tool (BLAST) in bioinformatics.
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Performance of Hadoop based Replica Exchange Molecular Dynamics on cloud computing.
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Finding differential splice junctions in rna-seq data as transcriptional biomarkers for prostate cancer.
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Efficient molecular dynamics simulation on reconfigurable models with multigrid method.
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Analyzing genetic response mechanisms associated with copper homeostasis in Populus trichocarpa using a bioinformatics approach.
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Conserved functional dynamics in the cell signaling protein Pin1: Investigations by bioinformatics and NMR.
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Exploring the Plasmodium falciparum transcriptome using hypergeometric analysis of time series (HATS).
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Computational tools for investigating the role of chromatin in regulating genomic functional elements.
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Computational Methods for Comparative Analysis of Rare Cell Subsets in Flow Cytometry.
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An informatics approach to chronic disease management in primary care: Blending business intelligence and care process models.
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Protein domain prediction using context statistics, the false discovery rate, and comparative genomics, with application to Plasmodium falciparum.
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Computational approaches to study the relation between genomic variations and phenotypes.
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A figure-based system for extracting, archiving, and retrieving protein-protein interactions (PPIS) from biomedical literature.
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Biological Simulation and Evolutionary Optimization: Modelling the Physiology Behind Influenza A Infection.
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