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Visualization for biological models,...

University of Washington.

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Visualization for biological models, simulation, and ontologies.

Record Type:	Language materials, printed : Monograph/item
Title/Author:	Visualization for biological models, simulation, and ontologies./
Author:	Yngve, Gary.
Description:	138 p.
Notes:	Adviser: Linda Shapiro.
Contained By:	Dissertation Abstracts International69-02B.
Subject:	Biology, Bioinformatics. -
Online resource:	http://pqdd.sinica.edu.tw/twdaoapp/servlet/advanced?query=3303414
ISBN:	9780549497127

Visualization for biological models, simulation, and ontologies.
Yngve, Gary.

Visualization for biological models, simulation, and ontologies. - 138 p.

Adviser: Linda Shapiro.

Thesis (Ph.D.)--University of Washington, 2008.

In this dissertation, I present three browsers that I have developed for the purpose of exploring, understanding, and analyzing models, simulations, and ontologies in biology and medicine. The first browser visualizes multidimensional simulation data as an animation. The second browser visualizes the equations of a complex model as a network and puts structure and organization on top of equations and variables. The third browser is an ontology viewer and editor, directly intended for the Foundational Model of Anatomy (FMA), but applicable to other ontologies as well. This browser has two contributions. First, it is a lightweight deliverable that lets someone easily dabble with the FMA. Second, it lets the user edit an ontology to create a view of it. For the ontology browser, I also conduct user studies to refine and evaluate the software.

ISBN: 9780549497127Subjects--Topical Terms:

1018415
Biology, Bioinformatics.

Visualization for biological models, simulation, and ontologies.
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020 $a 9780549497127
035 $a (UMI)AAI3303414
035 $a AAI3303414
040 $a UMI $c UMI
100 1 $a Yngve, Gary. $3 1022935
245 1 0 $a Visualization for biological models, simulation, and ontologies.
300 $a 138 p.
500 $a Adviser: Linda Shapiro.
500 $a Source: Dissertation Abstracts International, Volume: 69-02, Section: B, page: 1125.
502 $a Thesis (Ph.D.)--University of Washington, 2008.
520 $a In this dissertation, I present three browsers that I have developed for the purpose of exploring, understanding, and analyzing models, simulations, and ontologies in biology and medicine. The first browser visualizes multidimensional simulation data as an animation. The second browser visualizes the equations of a complex model as a network and puts structure and organization on top of equations and variables. The third browser is an ontology viewer and editor, directly intended for the Foundational Model of Anatomy (FMA), but applicable to other ontologies as well. This browser has two contributions. First, it is a lightweight deliverable that lets someone easily dabble with the FMA. Second, it lets the user edit an ontology to create a view of it. For the ontology browser, I also conduct user studies to refine and evaluate the software.
590 $a School code: 0250.
650 4 $a Biology, Bioinformatics. $3 1018415
650 4 $a Computer Science. $3 626642
690 $a 0715
690 $a 0984
710 2 0 $a University of Washington. $3 545923
773 0 $t Dissertation Abstracts International $g 69-02B.
790 $a 0250
790 1 0 $a Shapiro, Linda, $e advisor
791 $a Ph.D.
792 $a 2008
856 4 0 $u http://pqdd.sinica.edu.tw/twdaoapp/servlet/advanced?query=3303414