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Fast and Long: Characterizing Biofil...
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Peng, Lin Qian.
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Fast and Long: Characterizing Biofilm Growth Dynamics with Holographic Microscopy.
紀錄類型:
書目-電子資源 : Monograph/item
正題名/作者:
Fast and Long: Characterizing Biofilm Growth Dynamics with Holographic Microscopy./
作者:
Peng, Lin Qian.
出版者:
Ann Arbor : ProQuest Dissertations & Theses, : 2020,
面頁冊數:
115 p.
附註:
Source: Masters Abstracts International, Volume: 82-01.
Contained By:
Masters Abstracts International82-01.
標題:
Optics. -
電子資源:
https://pqdd.sinica.edu.tw/twdaoapp/servlet/advanced?query=28023156
ISBN:
9798662420410
Fast and Long: Characterizing Biofilm Growth Dynamics with Holographic Microscopy.
Peng, Lin Qian.
Fast and Long: Characterizing Biofilm Growth Dynamics with Holographic Microscopy.
- Ann Arbor : ProQuest Dissertations & Theses, 2020 - 115 p.
Source: Masters Abstracts International, Volume: 82-01.
Thesis (M.A.S.)--University of Toronto (Canada), 2020.
This item must not be sold to any third party vendors.
In this thesis, we applied a 4D imaging pipeline based on digital holographic microscopy (DHM) to characterize the development of Pseudomonas aerugi-nosa biofilms. A technique that can recover 3D information from a 2D image, DHM has unique advantages for three-dimensional imaging and is particularly well suited for tracking the dynamics of microscopic biological and physical phenomena. We characterized the growth dynamics of Pseudomonas aeruginosa biofilms to reveal how individual colonies aggregated to form a dense final network. Itwas found that inhibition of a specific hydrolase production encouraged the formation of a denser biofilm structure. This finding assists in guiding directions for developing drugs that can alter specific molecular pathways responsible for biofilm formation and structure. While DHM proved to be a powerful strategy for tracking biofilm formation, it is a computationally intensive approach. Accordingly, we explored the potential of convolutional neural networks (CNN) for reducing the reconstruction and image processing time. The integration of advanced computational approaches with improved hardware strategies, along with the fact that it is a label-less imaging approach, establishes DHM has a powerful new biophysical imaging platform for studying developmental dynamics.
ISBN: 9798662420410Subjects--Topical Terms:
517925
Optics.
Subjects--Index Terms:
3D imaging
Fast and Long: Characterizing Biofilm Growth Dynamics with Holographic Microscopy.
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In this thesis, we applied a 4D imaging pipeline based on digital holographic microscopy (DHM) to characterize the development of Pseudomonas aerugi-nosa biofilms. A technique that can recover 3D information from a 2D image, DHM has unique advantages for three-dimensional imaging and is particularly well suited for tracking the dynamics of microscopic biological and physical phenomena. We characterized the growth dynamics of Pseudomonas aeruginosa biofilms to reveal how individual colonies aggregated to form a dense final network. Itwas found that inhibition of a specific hydrolase production encouraged the formation of a denser biofilm structure. This finding assists in guiding directions for developing drugs that can alter specific molecular pathways responsible for biofilm formation and structure. While DHM proved to be a powerful strategy for tracking biofilm formation, it is a computationally intensive approach. Accordingly, we explored the potential of convolutional neural networks (CNN) for reducing the reconstruction and image processing time. The integration of advanced computational approaches with improved hardware strategies, along with the fact that it is a label-less imaging approach, establishes DHM has a powerful new biophysical imaging platform for studying developmental dynamics.
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