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Microbial ammonia oxidation in deep-...

Lam, T. Y. Phillis.

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Microbial ammonia oxidation in deep-sea hydrothermal plumes.

Record Type:	Language materials, printed : Monograph/item
Title/Author:	Microbial ammonia oxidation in deep-sea hydrothermal plumes./
Author:	Lam, T. Y. Phillis.
Description:	320 p.
Notes:	Chairperson: James P. Cowen.
Contained By:	Dissertation Abstracts International65-10B.
Subject:	Biogeochemistry. -
Online resource:	http://pqdd.sinica.edu.tw/twdaoapp/servlet/advanced?query=3151111
ISBN:	9780496109319

Microbial ammonia oxidation in deep-sea hydrothermal plumes.
Lam, T. Y. Phillis.

Microbial ammonia oxidation in deep-sea hydrothermal plumes. - 320 p.

Chairperson: James P. Cowen.

Thesis (Ph.D.)--University of Hawai'i at Manoa, 2004.

Autotrophic ammonia oxidation has been documented for the first time in deep-sea hydrothermal plumes---along the Endeavour Segment, Juan de Fuca Ridge, and in the Guaymas Basin, Gulf of California. Ammonium concentrations as high as 341 nM have been detected in the Endeavour plume, which supports autotrophic ammonia oxidation at ≤91 nM d-1, and potentially produces de novo organic carbon at a rate (0.6--13 mg C m-2 d-1) equivalent to 1300% particulate organic carbon flux from the surface ocean. The thick organic-rich sediment cover in the Guaymas Basin endows an even higher ammonium concentration (≤2.9 muM) to the overlying hydrothermal plume, which fuels potential ammonia oxidation at ≤517 nM d-1, but its relative contribution to organic carbon is perhaps small compared to the large amounts of organic carbon coming from the surface ocean and hydrothermal fluid discharges. In fact, the abundance of organic matter and other reduced chemicals in the Guaymas Basin water might have stimulated more heterotrophic activities and associated ammonium assimilation, or acted as natural inhibitors, thus preventing higher ammonia oxidation rates or larger populations of ammonia-oxidizing bacteria (AOB). Assimilation of ammonium occurs at rates comparable to ammonia oxidation. Hence, assimilation is an equally important ammonium uptake pathway in both water columns.

ISBN: 9780496109319Subjects--Topical Terms:

545717
Biogeochemistry.

Microbial ammonia oxidation in deep-sea hydrothermal plumes.
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020 $a 9780496109319
035 $a (UMI)AAI3151111
035 $a AAI3151111
040 $a UMI $c UMI
100 1 $a Lam, T. Y. Phillis. $3 1269172
245 1 0 $a Microbial ammonia oxidation in deep-sea hydrothermal plumes.
300 $a 320 p.
500 $a Chairperson: James P. Cowen.
500 $a Source: Dissertation Abstracts International, Volume: 65-10, Section: B, page: 5022.
502 $a Thesis (Ph.D.)--University of Hawai'i at Manoa, 2004.
520 $a Autotrophic ammonia oxidation has been documented for the first time in deep-sea hydrothermal plumes---along the Endeavour Segment, Juan de Fuca Ridge, and in the Guaymas Basin, Gulf of California. Ammonium concentrations as high as 341 nM have been detected in the Endeavour plume, which supports autotrophic ammonia oxidation at ≤91 nM d-1, and potentially produces de novo organic carbon at a rate (0.6--13 mg C m-2 d-1) equivalent to 1300% particulate organic carbon flux from the surface ocean. The thick organic-rich sediment cover in the Guaymas Basin endows an even higher ammonium concentration (≤2.9 muM) to the overlying hydrothermal plume, which fuels potential ammonia oxidation at ≤517 nM d-1, but its relative contribution to organic carbon is perhaps small compared to the large amounts of organic carbon coming from the surface ocean and hydrothermal fluid discharges. In fact, the abundance of organic matter and other reduced chemicals in the Guaymas Basin water might have stimulated more heterotrophic activities and associated ammonium assimilation, or acted as natural inhibitors, thus preventing higher ammonia oxidation rates or larger populations of ammonia-oxidizing bacteria (AOB). Assimilation of ammonium occurs at rates comparable to ammonia oxidation. Hence, assimilation is an equally important ammonium uptake pathway in both water columns.
520 $a AOB in both beta- and gamma-proteobacterial subgroups are present in the deep-sea hydrothermal plumes and background deep water at both locations, as well as in the hydrothermal fluids and sediments in the Guaymas Basin. They are often associated with particles greater than 3 mum in diameter (32--95%). The total abundance of AOB in the Endeavour plume (5 16 +/- 1.8 x 103 cells ml-1) is up to ten-fold that in the above-plume background (1.6 +/- 0.7 x 103 cells ml-1). A less dramatic increase is observed in the Guaymas Basin plume (8.0 +/- 0.9 x 10 3 cells ml-1) relative to its overlying deep water (1.5--3.5 x 103 cells ml-1). Sequence analyses of amplified partial 16S rRNA genes and the genes encoding ammonia monooxygenase subunit A (amoA) suggest that a novel lineage of beta-Proteobacterial AOB might be present in both water columns.
590 $a School code: 0085.
650 4 $a Biogeochemistry. $3 545717
650 4 $a Biology, Microbiology. $3 1017734
650 4 $a Biology, Oceanography. $3 783691
690 $a 0410
690 $a 0416
690 $a 0425
710 2 $a University of Hawai'i at Manoa. $3 1017511
773 0 $t Dissertation Abstracts International $g 65-10B.
790 $a 0085
790 1 0 $a Cowen, James P., $e advisor
791 $a Ph.D.
792 $a 2004
856 4 0 $u http://pqdd.sinica.edu.tw/twdaoapp/servlet/advanced?query=3151111