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Cell States and Therapeutic Targets in Pancreatic Cancer.
Record Type:
Electronic resources : Monograph/item
Title/Author:
Cell States and Therapeutic Targets in Pancreatic Cancer./
Author:
Guo, James.
Description:
1 online resource (197 pages)
Notes:
Source: Dissertations Abstracts International, Volume: 84-12, Section: B.
Contained By:
Dissertations Abstracts International84-12B.
Subject:
Biology. -
Online resource:
http://pqdd.sinica.edu.tw/twdaoapp/servlet/advanced?query=30485212click for full text (PQDT)
ISBN:
9798379614713
Cell States and Therapeutic Targets in Pancreatic Cancer.
Guo, James.
Cell States and Therapeutic Targets in Pancreatic Cancer.
- 1 online resource (197 pages)
Source: Dissertations Abstracts International, Volume: 84-12, Section: B.
Thesis (Ph.D.)--Harvard University, 2023.
Includes bibliographical references
Pancreatic ductal adenocarcinoma (PDAC) is an aggressive cancer wherein treatment resistance is common and survival is poor. Prior transcriptional profiling studies have revealed two major cell states in untreated human PDAC - classical and basal-like - with differential prognoses and clinical responses to treatment. As such, transcriptional cell states have been the subject of considerable investigation in the pancreatic cancer field over the past decade. While the basal-like vs. classical classification can inform prognosis, many patients with localized disease receive upfront chemotherapy prior to surgery, and most patients enrolled on clinical trials have likely received prior chemotherapy. We therefore sought to understand whether and how treatment alters the transcriptional cell state taxonomy and performed single-nucleus RNA-seq and spatial mRNA profiling on primary tumors treated with or without neoadjuvant chemotherapy and radiation. In doing so, we discovered the existence of a novel 'neural-like progenitor' cancer cell state which was significantly enriched in treated cancer cells, and found that it is regulated by GLIS3, a transcription factor canonically involved in neuroendocrine lineage specification. We next sought to functionally investigate the biology of the classical, basal-like, and neural-like cell states through the development of ex vivo and in vivo isogenic models driven by transcription factor overexpression. This revealed distinct morphologies, in vivo growth kinetics, metastatic proclivities, and drug sensitivities associated with each cell state. Furthermore, cell-intrinsic gene expression patterns were associated with cell-extrinsic microenvironmental features; for instance, the neural-like cancer state was enriched with a gene signature for perineural invasion. Finally, we leveraged functional genetic screens in cell lines and patient-derived organoids to survey novel or underexplored therapeutic targets for this devastating disease. Together, our findings improve our understanding of the biology of cancer cell states and provide guidance for future target validation efforts in pancreatic cancer.
Electronic reproduction.
Ann Arbor, Mich. :
ProQuest,
2023
Mode of access: World Wide Web
ISBN: 9798379614713Subjects--Topical Terms:
522710
Biology.
Subjects--Index Terms:
Aggressive cancerIndex Terms--Genre/Form:
542853
Electronic books.
Cell States and Therapeutic Targets in Pancreatic Cancer.
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Cell States and Therapeutic Targets in Pancreatic Cancer.
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Source: Dissertations Abstracts International, Volume: 84-12, Section: B.
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Advisor: Aguirre, Andrew J.
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Includes bibliographical references
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Pancreatic ductal adenocarcinoma (PDAC) is an aggressive cancer wherein treatment resistance is common and survival is poor. Prior transcriptional profiling studies have revealed two major cell states in untreated human PDAC - classical and basal-like - with differential prognoses and clinical responses to treatment. As such, transcriptional cell states have been the subject of considerable investigation in the pancreatic cancer field over the past decade. While the basal-like vs. classical classification can inform prognosis, many patients with localized disease receive upfront chemotherapy prior to surgery, and most patients enrolled on clinical trials have likely received prior chemotherapy. We therefore sought to understand whether and how treatment alters the transcriptional cell state taxonomy and performed single-nucleus RNA-seq and spatial mRNA profiling on primary tumors treated with or without neoadjuvant chemotherapy and radiation. In doing so, we discovered the existence of a novel 'neural-like progenitor' cancer cell state which was significantly enriched in treated cancer cells, and found that it is regulated by GLIS3, a transcription factor canonically involved in neuroendocrine lineage specification. We next sought to functionally investigate the biology of the classical, basal-like, and neural-like cell states through the development of ex vivo and in vivo isogenic models driven by transcription factor overexpression. This revealed distinct morphologies, in vivo growth kinetics, metastatic proclivities, and drug sensitivities associated with each cell state. Furthermore, cell-intrinsic gene expression patterns were associated with cell-extrinsic microenvironmental features; for instance, the neural-like cancer state was enriched with a gene signature for perineural invasion. Finally, we leveraged functional genetic screens in cell lines and patient-derived organoids to survey novel or underexplored therapeutic targets for this devastating disease. Together, our findings improve our understanding of the biology of cancer cell states and provide guidance for future target validation efforts in pancreatic cancer.
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Mode of access: World Wide Web
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84-12B.
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http://pqdd.sinica.edu.tw/twdaoapp/servlet/advanced?query=30485212
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click for full text (PQDT)
based on 0 review(s)
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